semra
Getting Started
Installation
Mapping Assembly Pipeline
SeMRA Raw Semantic Mappings Database
Domain-specific Processed Mapping Databases
Prioritizing CURIEs in a Dataframe
Data Structure
Getting and Writing Semantic Mappings
Functions
from_bioontologies
from_cache_df
from_digraph
from_jsonl
from_jsonl()
from_multidigraph
from_pickle
from_pyobo
from_sssom
from_sssom_df
get_sssom_df
to_digraph
to_multidigraph
write_jsonl
write_neo4j
write_pickle
write_sssom
Reference
Command Line Interface
Querying with Cypher
semra
Getting and Writing Semantic Mappings
from_jsonl
View page source
from_jsonl
from_jsonl
(
path
:
str
|
Path
,
*
,
show_progress
:
bool
=
False
,
stream
:
Literal
[
False
]
=
False
)
→
list
[
Mapping
]
[source]
from_jsonl
(
path
:
str
|
Path
,
*
,
show_progress
:
bool
=
False
,
stream
:
Literal
[
True
]
=
True
)
→
Iterable
[
Mapping
]
Read a list of Mapping objects from a JSONL file.