Getting and Writing Semantic Mappings

I/O functions for SeMRA.

Functions

`from_bioontologies`(prefix[, confidence])	Get mappings from a given ontology via `bioontologies`.
`from_cache_df`(path, source_prefix, *[, ...])	Get mappings from a `pyobo`-flavored cache file.
`from_digraph`(graph)	Extract mappings from a simple directed graph data model.
`from_jsonl`(-> list[~semra.struct.Mapping])	Read a list of Mapping objects from a JSONL file.
`from_multidigraph`(graph)	Extract mappings from a multi-directed graph data model.
`from_pickle`(path)	Read the mappings from a pickle.
`from_pyobo`(prefix[, target_prefix, ...])	Get mappings from a given ontology via `pyobo`.
`from_sssom`(path, *[, mapping_set_id, ...])	Get mappings from a path to a SSSOM TSV file.
`from_sssom_df`(df, *[, mapping_set_id, ...])	Get mappings from a SSSOM dataframe.
`get_sssom_df`(mappings, *[, add_labels, prune])	Get a SSSOM dataframe.
`to_digraph`(mappings)	Convert mappings into a simple directed graph data model.
`to_multidigraph`(mappings, *[, progress])	Convert mappings into a multi directed graph data model.
`write_jsonl`(-> None)	Write a list of Pydantic objects into a JSONL file.
`write_neo4j`(mappings, directory, *[, ...])	Write all files needed to construct a Neo4j graph database from a set of mappings.
`write_pickle`(mappings, path)	Write the mappings as a pickle.
`write_sssom`(...)	Export mappings as an SSSOM file (could be lossy).